If you’re wondering where to stay in Borneo, the answer depends a lot on what kind of experience you’re after; whether it’s diving deep into rainforest wildlife, relaxing on an island, or staying somewhere accessible yet nature-rich. Natural World Safaris recommends a carefully curated selection of lodges, each offering close access to Borneo’s most iconic habitats while supporting eco-conscious tourism.
This is especially useful for photographers who want immersive stays in prime wildlife locations like Danum Valley and the Kinabatangan River, giving them real opportunities to capture orangutans, pygmy elephants, hornbills, and more. Also for families, who benefit from lodges that balance adventure and comfort; think river cruises, gentle jungle walks, and safe, cosy cabins. And for first-time visitors, who might feel overwhelmed by the sheer scale of Borneo.
The places listed here help you discover the key wildlife spots while staying in eco-lodges that make planning and navigating easier. Below you’ll find the top recommended lodges and what makes each one special, from luxurious rainforest retreats to rustic riverside escapes.
These are by no means the only accommodations we use for our Borneo holidays, so please contact us if you have another property in mind.
Borneo Rainforest Lodge is an award-winning lodge situated right in the heart of one of the world's oldest rainforests, Danum Valley. Surrounded by unique species of flora and fauna, it boasts itself as the perfect getaway destination for nature and wildlife enthusiasts that wish to enjoy the beauty of Mother Nature without giving up comfort and luxury.
Abai Jungle Lodge, located beside the Kinabatangan River, provides an unforgettable stay amid Sabah's rainforest. This eco-friendly retreat, which is only accessible via an idyllic one-hour boat ride from Sandakan jetty or Sukau, offers a calm escape from the rush and bustle of contemporary life.
Bunga Raya is a wildlife enthusiast’s tropical island paradise. Comprising of just 48 villas, this laid-back boutique hotel and spa offers the ultimate in seclusion and tranquillity. Nestled into a crescent shaped bay of Gaya Island, head one way to immerse yourself in the shimmering waters of the ocean, or the other to explore the rainforest-covered hills in search of the resident wildlife.
Featuring 120 spacious hill villas, this natural sanctuary is a romantic retreat in stunning surroundings. With a wealth of naturalist-led activities, the curious can head out to explore the natural wonders of the area. Those who wish to relax can make the most of the idyllic setting, swimming pool, or pick out, among the mangroves, the seamlessly integrated spa for some exquisite treatments, alleviating modern stresses.
A charming resort tucked in the wilderness of Lower Kinabatangan with wooden walkways, made from local hardwood called “Belian” leading into the surrounding freshwater swamps, limestone forests and mangrove forests. The wetlands comprise three forest reserves including Trusan Kinabatangan Forest Reserve, Kulamba Wildlife reserve and Kuala Segama Forest Reserve. The diversity of this area is unimaginable with a record of 1000 plant species, more than 200 bird species, 90 fish species and reptilian and 50 mammal species.
Sepilok Jungle Resort, located in the beautiful Borneo Rainforest in Sandakan, Sabah, Malaysia, provides a calm getaway into nature. This resort, surrounded by thick jungle and wonderfully maintained gardens, is a retreat for visitors seeking both quiet and action.
Tabin Wildlife Resort, located among the pristine wilderness of Tabin Wildlife Reserve, provides a natural rainforest experience unlike any other. With only 20 beautiful timber cottages, including River cottages and Hill Chalets, guests may relax in nature's embrace. From your private balcony, you may wake up to the calming sounds of the Lipad River or enjoy the peaceful views of the hillside woodland.
Sukau Rainforest Lodge stands as an example of sustainable luxury in the lush embrace of Borneo's Kinabatangan River. This outstanding eco-lodge, named a 'National Geographic Unique Lodge of the World', provides an immersive getaway into the heart of the jungle. Settle into cosy cottages made of locally sourced materials, where modern amenities combine harmoniously with the surrounding countryside
Borneo Eagle Resort epitomises luxury and signature style. Set in a private bay just off the coast of Borneo, this property is perfect for a tranquil getaway. Enjoy days exploring the picturesque landscape and discovering a range of exciting activities. At Borneo Eagle Resort, guests can choose from thirteen luxurious oceanfront villas, each offering panoramic views.
Conservation Minded
We will only work with the best guides and most eco-conscious operators and will always put the protection of the rainforest and its inhabitants above commercial interests. Visit the Proboscis Monkey Sanctuary, the Sun Bear Conservation Centre and the Orangutan Rehabilitation Centre to learn about the work done to protect these endangered species.
Wealth of Experience
To sell Borneo well, you need to know it from the ground upwards; this unique destination is forever changing. Through our years of experience designing safaris and time spent on the ground, we are experts in putting you in the right place at the right time to witness the wildlife in its natural environment, be it orangutans in the misty rainforests or sea turtles in the turquoise waters
Conservation Minded
We will only work with the best guides and most eco-conscious operators and will always put the protection of the rainforest and its inhabitants above commercial interests. Visit the Proboscis Monkey Sanctuary, the Sun Bear Conservation Centre and the Orangutan Rehabilitation Centre to learn about the work done to protect these endangered species.
